Visualizing your data

DEXP relies on napari to visualize the data, so make sure it’s installed.

Once napari is installed there are two ways you can view your dataset.

  • With our DEXP’s command line, for example:

       dexp view path_to_your_dataset.zarr
    
    Execute ``dexp view --help`` to see additional options.
    
  • Using DEXP’s napari plugin:

    1. Install the napari-dexp with

      conda install napari-dexp -c conda-forge
      
    2. Open your dataset with napari as usual

      napari path_to_your_dataset.zarr
      

      NOTE: Depending on the ordering of the readers’ plugin other plugins might try reading the data first, which could result in errors or warnings.