Hide navigation sidebar

Hide table of contents sidebar

Toggle site navigation sidebar

dexp documentation

Toggle table of contents sidebar

dexp documentation

Getting started

Install
Contact us

How-to guides

Converting to our file format
Visualizing your data
Processing a multi-view dataset using DEXP CLI
Implementing your own processing pipeline

Commands

Image processing
Video rendering

API

API
Toggle child pages in navigation
- dexp.datasets
  Toggle child pages in navigation
- dexp.optics
  Toggle child pages in navigation
  - dexp.optics.psf
    Toggle child pages in navigation
    - dexp.optics.psf.microscope_psf
    - dexp.optics.psf.standard_psfs
- dexp.processing
  Toggle child pages in navigation
  - dexp.processing.color
    Toggle child pages in navigation
  - dexp.processing.crop
    Toggle child pages in navigation
    - dexp.processing.crop.background
    - dexp.processing.crop.demo
      Toggle child pages in navigation
      - dexp.processing.crop.demo.demo_rep_crop
    - dexp.processing.crop.representative_crop
  - dexp.processing.deconvolution
    Toggle child pages in navigation
  - dexp.processing.denoising
    Toggle child pages in navigation
  - dexp.processing.deskew
    Toggle child pages in navigation
  - dexp.processing.equalise
    Toggle child pages in navigation
    - dexp.processing.equalise.equalise_intensity
  - dexp.processing.filters
    Toggle child pages in navigation
  - dexp.processing.fusion
    Toggle child pages in navigation
  - dexp.processing.interpolation
    Toggle child pages in navigation
    - dexp.processing.interpolation.warp
  - dexp.processing.morphology
    Toggle child pages in navigation
    - dexp.processing.morphology.component_tree
    - dexp.processing.morphology.utils
  - dexp.processing.multiview_lightsheet
    Toggle child pages in navigation
    - dexp.processing.multiview_lightsheet.deconvolution
    - dexp.processing.multiview_lightsheet.fusion
      Toggle child pages in navigation
  - dexp.processing.optimization
    Toggle child pages in navigation
    - dexp.processing.optimization.grid_search
  - dexp.processing.registration
    Toggle child pages in navigation
  - dexp.processing.remove_beads
    Toggle child pages in navigation
    - dexp.processing.remove_beads.beadsremover
  - dexp.processing.restoration
    Toggle child pages in navigation
  - dexp.processing.segmentation
    Toggle child pages in navigation
    - dexp.processing.segmentation.watershed
  - dexp.processing.utils
    Toggle child pages in navigation
- dexp.utils
  Toggle child pages in navigation
  - dexp.utils.backends
    Toggle child pages in navigation
  - dexp.utils.config
  - dexp.utils.dask
  - dexp.utils.fft
  - dexp.utils.lock
  - dexp.utils.misc
  - dexp.utils.robocopy
  - dexp.utils.slicing
  - dexp.utils.speed_test
  - dexp.utils.testing
    Toggle child pages in navigation
    - dexp.utils.testing.testing
  - dexp.utils.timeit
- dexp.video
  Toggle child pages in navigation
- dexp.volumerender
  Toggle child pages in navigation

Toggle table of contents sidebar

dexp.processing.color.cairo_utils

Functions

get_array_for_cairo_surface(surface)

Returns an array given a ImageSurface from PyCairo.

dexp.processing.color.colormap

dexp.processing.color.border

Copyright © 2021. Chan Zuckerberg Biohub. All rights reserved | Created using Sphinx and @pradyunsg's Furo theme. | Show Source